Chaoqi Yang







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  • Publications
    [Full List (Google Scholar)]


    --- 2024 ---

  • Fine-grained Control of Generative Data Augmentation in IoT Sensing
    Tianshi Wang, Qikai Yang, Ruijie Wang, Dachun Sun, Jinyang Li, Yizhuo Chen, Yigong Hu, Chaoqi Yang, Tomoyoshi Kimura, Denizhan Kara, Tarek F. Abdelzaher
    The 38th Conference on Neural Information Processing Systems (NeurIPS'24)

  • Topic-Oriented Open Relation Extraction with A Priori Seed Generation
    Linyi Ding, Jinfeng Xiao, Sizhe Zhou, Chaoqi Yang, Jiawei Han
    The 2024 Conference on Empirical Methods in Natural Language Processing (EMNLP'24 Main)

  • If LLM Is the Wizard, Then Code Is the Wand: A Survey on How Code Empowers LLMs to Serve as Intelligent Agents
    Ke Yang*, Jiateng Liu*, John Wu, Chaoqi Yang, Yi Fung, Sha Li, Zixuan Huang, Xu Cao, Xingyao Wang, Heng Ji, ChengXiang Zhai
    ICLR 2024 Workshop on LLM Agents (LLMAgents'24)


    • --- 2023 ---

  • BIOT: Biosignal Transformer for Cross-data Learning in the Wild
    Chaoqi Yang , M Brandon Westover, Jimeng Sun
    The 37th Conference on Neural Information Processing Systems (NeurIPS'23)
    [Code] [Video] [Slides] [Poster]

  • Multi-Faceted Analysis and Prediction for the Outbreak of Pediatric Respiratory Syncytial Virus
    Chaoqi Yang , Junyi Gao, Lucas Glass, Adam Cross, Jimeng Sun
    Journal of the American Medical Informatics Association (JAMIA'23)
    [Code] [Slides] [Visualization]

  • Self-supervised EEG Representation Learning for Automatic Sleep Staging
    Chaoqi Yang , Danica Xiao, M Brandon Westover, Jimeng Sun
    Journal of Medical Internet Research (JMIR-AI'23)
    [Code] [Slides] [Video] [Loss Analysis]

  • PyHealth: A Deep Learning Toolkit For Healthcare Applications
    Chaoqi Yang*, Zhenbang Wu*, Patrick Jiang, Zhen Lin, Junyi Gao, Benjamin Danek, Jimeng Sun
    The 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining (KDD'23, Tutorial)
    [Code] [Website] [Documents] [Videos] [Slides] [Notebooks]

  • ManyDG: Many-domain Generalization for Healthcare Applications
    Chaoqi Yang, M Brandon Westover, Jimeng Sun
    The 11th International Conference on Learning Representations (ICLR'23)
    [Code] [Poster] [Slides] [Video]


    • --- 2022 ---

  • ATD: Augmented CP Tensor Decomposition by Self-supervision
    Chaoqi Yang, Cheng Qian, Navjot Singh, Cao Xiao, M Brandon Westover, Edgar Solomonik, Jimeng Sun
    The 36th Conference on Neural Information Processing Systems (NeurIPS'22)
    [Code] [Slides] [Video] [Poster]

  • MedML: Fusing Medical Knowledge and ML Models for Early Pediatric COVID-19 Hospitalization and Severity Prediction
    Junyi Gao, Chaoqi Yang, George Heintz, Scott Barrows, Elise Albers, Mary Stapel, Sara Warfield, Adam Cross, Jimeng Sun
    Cell Press (iScience'22) [Code]

  • Semi-supervised Hypergraph Node Classification on Hypergraph Line Expansion
    Chaoqi Yang, Ruijie Wang, Shuochao Yao, Tarek Abdelzaher
    The 31th ACM International Conference on Information and Knowledge Management (CIKM'22)
    [Code] [Video] [Slides] [Photo]

  • GOCPT: Generalized Online Canonical Polyadic Tensor Factorization and Completion
    Chaoqi Yang, Cheng Qian, Jimeng Sun
    The 31th International Joint Conference on Artificial Intelligence (IJCAI'22)
    [Code] [Slides] [Video] [Spotlight] [PyPi Package]

  • MoTiAC: Multi-Objective Actor-Critics for Real-Time Bidding
    Haolin Zhou*, Chaoqi Yang*, Xiaofeng Gao, Qiong Chen, Gongshen Liu, Guihai Chen
    European Conference on Machine Learning and Practice of Knowledge Discovery in Databases (ECML-PKDD'22)


    • --- 2021 ---

  • MTC: Multiresolution Tensor Completion from Partial and Coarse Observations
    Chaoqi Yang, Navjot Singh, Cao Xiao, Cheng Qian, Edgar Solomonik, Jimeng Sun
    The 27th ACM SIGKDD Conference on Knowledge Discovery and Data Mining (KDD'21)
    [Code] [Video] [Slides] [Poster] [M.S. Thesis]

  • SafeDrug: Dual Molecular Graph Encoders for Recommending Effective and Safe Drug Combinations
    Chaoqi Yang, Cao Xiao, Fenglong Ma, Lucas Glass, Jimeng Sun
    The 30th International Joint Conference on Artificial Intelligence (IJCAI'21)
    [Code] [Video] [Slides] [Poster]

  • Change Matters: Medication Change Prediction with Recurrent Residual Networks
    Chaoqi Yang, Cao Xiao, Lucas Glass, Jimeng Sun
    The 30th International Joint Conference on Artificial Intelligence (IJCAI'21)
    [Code] [Video] [Slides] [Poster]

  • Revisiting Over-smoothing in Deep GCNs
    Chaoqi Yang, Ruijie Wang, Shuochao Yao, Shengzhong Liu, Tarek Abdelzaher
    Preprint [Code]


    • --- 2020 ---

  • Hierarchical Overlapping Belief Estimation by Structured Matrix Factorization
    Chaoqi Yang, Jinyang Li, Ruijie Wang, Shuochao Yao, Huajie Shao, Dongxin Liu, Shengzhong Liu, Tianshi Wang and Tarek Abdelzaher
    The 2020 IEEE/ACM International Conference on Advances in Social Network Analysis and Mining (ASONAM'20) [Code] [Slides]

© YCQ (updated at May 2024)